BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A10LP1|AL427247
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1541 1868 0.0
>3x_Contig1541
Length = 10565
Score = 1868 bits (941), Expect = 0.0
Identities = 965/973 (99%), Gaps = 1/973 (0%)
Strand = Plus / Plus
Query: 1 gatcatgatcgctttgggtttcggtttctccgttatgtttgccgttttcatcttcttcag 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 791 gatcatgatcgctttgggtttcggtttctccgtcatgtttgccgttttcatcttcttcag 850
Query: 61 agtttctggtggtaatttgaacccagctgttactttgactttggtcttgacaaacgtcat 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 agtctctggtggtaatttgaacccagctgttactttgactttggtcttgacaaacgtcat 910
Query: 121 cccatggccaagagctcttgtcatgtggatcagtcaaatggttgccggtatggctgctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 cccatggccaagagctcttgtcatgtggatcagtcaaatggttgccggtatggctgctgc 970
Query: 181 aggtgctgcttctgccatgaccccaggtgaaatcttattcgctaacggtctaggtggtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 aggtgctgcttctgccatgaccccaggtgaaatcttattcgctaacggtctaggtggtgg 1030
Query: 241 tgcttccagatccagaggtgttttcttggaagccttcggtaccgcaatcctatgttccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1031 tgcttccagatccagaggtgttttcttggaagccttcggtaccgcaatcctatgtaccac 1090
Query: 301 cgttttgttcatggccgttgaaaagcataaggctaccccaatggctccattcgccattgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1091 cgttttgttcatggccgttgaaaagcataaggctaccccaatggctccattcgccattgg 1150
Query: 361 tattgcattgtttgttggtcacttgatctgtgtttactacaccggtgccggtttgaaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 tattgcattgtttgttggtcacttgatctgtgtttactacaccggtgccggtttgaaccc 1210
Query: 421 agccagatctttcggtccatgtatcgctgctgcctctttccctaactaccattggattta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 agccagatctttcggtccatgtatcgctgctgcctctttccctaactaccattggattta 1270
Query: 481 ctggattggtccaggtcttggtgccatcatgtctgccgctttgtggcacatcttgaagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 ctggattggtccaggtcttggtgccatcatgtctgccgctttgtggcacatcttgaagtt 1330
Query: 541 cttgaattatgagaactgtaacccaggtcaagatgatatcctataatttcaacatcctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1331 cttgaattatgagaactgtaacccaggtcaagatgatatcctataatttcaacatcctgc 1390
Query: 601 aattggttaaaagaaagagacataataaaaatataggattcaaagagatgcgtgacgcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1391 aattggttaaaagaaagagacataataaaaatataggattcaaagagatgcgtgacgcat 1450
Query: 661 gatctcattgaggtcgaattactcgaaggacagacaatccttgaaaaggacaaagaatgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1451 gatctcattgaggtcgaattactcgaaggacagacaatccttgaaaaggacaaagaatgg 1510
Query: 721 acagtgaaaaaaaaaaaaaaagcttggagctattcgcatcaggaccccttccactcacca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1511 acagtgaaaaaaaaaaaaaaagcttggagctattcgcatcaggaccccttccactcacca 1570
Query: 781 cactcctcgctcacctccgtcaagcttacacataatgatattaacatcaataataacact 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1571 cactcctcgctcacctccgtcaagcttacacataatgatattaacatcaataataacact 1630
Query: 841 agttataatcataatatcttaatactaattaaataagaaataatttcacaacatcaaacg 900
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1631 agtaataatcataatatcttaatactaattaaataagaaataatttcacaacatcaaacg 1690
Query: 901 cyaatatcaaacttgtgccaaacactcactgattgttttctcaagggactttctcaattk 960
| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1691 ctaatatcaaacttgtgccaaacactcactgattgttttctcaaggaactttctcaattg 1750
Query: 961 at-acgcatgaat 972
|| ||||||||||
Sbjct: 1751 ataacgcatgaat 1763
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,429
Number of Sequences: 1807
Number of extensions: 16429
Number of successful extensions: 2234
Number of sequences better than 1.0e-20: 1
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)